28 lines
872 B
Factor
28 lines
872 B
Factor
! Copyright (C) 2020 Bubbler.
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! See http://factorcode.org/license.txt for BSD license.
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USING: help.markup help.syntax kernel sequences strings ;
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IN: rosalind.tran
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HELP: tran
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{ $values
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{ "str1" string } { "str2" string }
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{ "ratio" null }
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}
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{ $description "Solves the problem TRAN on Rosalind: given two DNA strings of equal length, evaluate the ratio between transitions (A-G, C-T point mutations) and transversions (other kinds of point mutations)." } ;
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HELP: tran-main
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{ $description "Solves the problem TRAN on Rosalind, using a real dataset." } ;
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HELP: trans-type
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{ $values
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{ "seq" sequence }
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{ "type/f" null }
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}
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{ $description "Given a sequence of two DNA symbols, classifies the mutation as a transition (1), transversion (2), or neither (f)." } ;
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ARTICLE: "rosalind.tran" "rosalind.tran"
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{ $vocab-link "rosalind.tran" }
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;
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ABOUT: "rosalind.tran"
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